Open Source Code Repository
The links below are to code repos maintained by individual lab members.
Open-Access Code Disclaimer
No guarantees, no warranty, wysiwyg.
If our code helped you, please acknowledge us in your references.
GitHub Code Repositories
- GRIN Lens Toolbox: GRIN Lens image analysis software (matlab)
- NeuroFIT: fluorescent imaging and cell reconstruction toolbox (matlab)
- plasticity: MCMC framework for testing S3D models of neural plasticity (matlab & python)
- NeuroMesh: mesh maker for designing morphological surface meshes of neurons (matlab & python)
- FLIMtoolbox: a toolbox for analyzing FLIM / FRET data (matlab)
- CellFinder: automated cell detection and image processing to quantify changes in fluorescence intensity